sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A578-A984
X
>3OI1-A578-A984
X
>3KNK-A1962-A2726
X
>3KNK-A578-A989
X
>3PDR-A152-A88
X
>3PDR-X152-X88
X
>2QBZ-X144-X88
X
</seq>
<hsp>
0 1:0.0775659674195
0 2:0.975256086316
0 3:0.395206561132
0 4:0.82919010672
0 5:0.76161112644
0 6:0.833792852182
1 2:0.99999623443
1 3:0.419054459062
1 4:0.825175893104
1 5:0.761104229139
1 6:0.813654921585
2 3:0.656770055062
2 4:0.733632917046
2 5:0.750052340725
2 6:0.918388270156
3 4:0.627630417627
3 5:0.547088577467
3 6:0.702958365208
4 5:0.223448539497
4 6:0.279588970296
5 6:0.307695821543
</hsp>