sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNH-A741-A776
X
>3KNK-A1701-A1711
X
>2OTJ-01144-01120
X
>3R8T-A2853-A2848
X
>3CME-01321-0627
X
>2J03-A821-A1142
X
>3OHK-A1472-A1419
X
>3CCS-0572-0561
X
>2J01-A100-A71
X
>3F1H-A2477-A2443
X
>1K9M-A296-A327
X
</seq>
<hsp>
0 1:0.803940980689
0 2:0.638829987387
0 3:0.603881690767
0 4:0.460818420735
0 5:0.598608740068
0 6:0.348525305804
0 7:0.416952564897
0 8:0.60475631848
0 9:0.416524441435
0 10:0.519407942962
1 2:0.883853476423
1 3:0.999997066382
1 4:0.418807044059
1 5:0.514740799806
1 6:0.610446339617
1 7:0.748685249655
1 8:0.680588447097
1 9:0.477376620737
1 10:0.728370831735
2 3:0.90906367857
2 4:0.566106029648
2 5:0.592859904987
2 6:0.702339793654
2 7:0.419310206953
2 8:0.544059116181
2 9:0.662344215339
2 10:0.790169207114
3 4:0.773366402596
3 5:0.648760468265
3 6:0.674677857489
3 7:0.629709787659
3 8:0.757588202164
3 9:0.68347791347
3 10:0.754537037887
4 5:0.392322382461
4 6:0.365707027727
4 7:0.473373491671
4 8:0.542338596049
4 9:0.316689474623
4 10:0.619950835011
5 6:0.458940726939
5 7:0.350975084052
5 8:0.301429922058
5 9:0.312905947469
5 10:0.514194839534
6 7:0.442207291966
6 8:0.512060880579
6 9:0.249239017006
6 10:0.41263796324
7 8:0.243681403949
7 9:0.35898056245
7 10:0.420263082925
8 9:0.364131144341
8 10:0.368436558003
9 10:0.325960448683
</hsp>