sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-01438-01421
X
>3R8S-A851-A918
X
>3G9C-R69-R79
X
>3KNK-A1470-A1432
X
>3OHY-A246-A260
X
>3F1G-A51-A346
X
>3G9C-P69-P79
X
>3KNI-A2634-A2584
X
</seq>
<hsp>
0 1:0.383326333045
0 2:0.729982796087
0 3:0.491245493726
0 4:1.0
0 5:0.694779703329
0 6:0.652533223565
0 7:0.766629915696
1 2:0.480459198952
1 3:0.471379990776
1 4:0.807007439532
1 5:0.499571212886
1 6:0.343290260873
1 7:0.515317216227
2 3:0.475993615324
2 4:0.47891031944
2 5:0.332578061222
2 6:0.221956409928
2 7:0.247877142484
3 4:0.557190215213
3 5:0.437989622061
3 6:0.518158840368
3 7:0.505426030005
4 5:0.445902512173
4 6:0.610763136398
4 7:0.491730831534
5 6:0.372275445204
5 7:0.374084151354
6 7:0.303490528145
</hsp>