sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CME-01845-01961
X
>2J00-V27-V43
X
>3CD6-01475-01628
X
>3OH7-A106-A49
X
>2PXQ-B21-B30
X
>1K9M-B32-B46
X
</seq>
<hsp>
0 1:0.885526692831
0 2:0.401163753501
0 3:0.447286748873
0 4:0.827979054513
0 5:0.58206361543
1 2:1.0
1 3:0.751771073274
1 4:0.348445857526
1 5:0.50594931846
2 3:0.467484481598
2 4:0.991752384038
2 5:0.766167184691
3 4:0.824513377827
3 5:0.506946923699
4 5:0.446485163094
</hsp>