sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UUB-A363-A361
X
>3F1E-A363-A361
X
>3F1G-A363-A361
X
>1VBX-B42-B40
X
>1VBZ-B42-B40
X
>2OJ3-B42-B40
X
>1SJ4-R42-R40
X
>1VC0-B42-B40
X
>1SJF-B43-B41
X
>1VC6-B41-B39
X
>2OIH-B42-B40
X
>1SJ3-R42-R40
X
>1VBY-B42-B40
X
>1DRZ-B41-B39
X
>1CX0-B41-B39
X
</seq>
<hsp>
0 1:0.464257511052
0 2:0.469599605952
0 3:0.708259247982
0 4:0.999991588142
0 5:0.669227193641
0 6:0.504935488351
0 7:0.585915239335
0 8:0.683995587786
0 9:0.634727308341
0 10:0.557927878645
0 11:0.845134027659
0 12:0.760492843915
0 13:0.648345086547
0 14:0.693313167178
1 2:0.0321023471478
1 3:0.700374903552
1 4:0.735154301521
1 5:0.681865437134
1 6:0.458410764954
1 7:0.648414348396
1 8:0.426124923799
1 9:0.639538266595
1 10:0.407631565847
1 11:0.754931695311
1 12:0.656779746026
1 13:0.489350047535
1 14:0.524905251321
2 3:0.707627637013
2 4:0.73039345477
2 5:0.679192013184
2 6:0.46886826216
2 7:0.652016623239
2 8:0.411874574239
2 9:0.637666716348
2 10:0.414307092189
2 11:0.764466988826
2 12:0.663446174758
2 13:0.490926660764
2 14:0.527420504661
3 4:0.58214096645
3 5:0.757083234638
3 6:0.397112670911
3 7:0.219650186256
3 8:0.717233903934
3 9:0.292512222711
3 10:0.414133356498
3 11:0.277940004598
3 12:0.454106155219
3 13:0.381839526965
3 14:0.357493853077
4 5:0.82383748914
4 6:0.667642078033
4 7:0.64472852083
4 8:0.574298838727
4 9:0.614111665159
4 10:0.593596087078
4 11:0.559780228539
4 12:0.554912085196
4 13:0.569242044123
4 14:0.467862883412
5 6:0.599013999788
5 7:0.621659882734
5 8:0.461005419786
5 9:0.729430268965
5 10:0.64918309581
5 11:0.79870282058
5 12:0.602578450425
5 13:0.764306913948
5 14:0.657059234607
6 7:0.412966164447
6 8:0.538895896468
6 9:0.4873715998
6 10:0.150599903331
6 11:0.555302035379
6 12:0.579427607534
6 13:0.417992397687
6 14:0.45737961064
7 8:0.639186365592
7 9:0.216107792446
7 10:0.445952975727
7 11:0.3566828507
7 12:0.392958741079
7 13:0.39301181882
7 14:0.331182087735
8 9:0.629602436283
8 10:0.485704085526
8 11:0.745476812087
8 12:0.596710982727
8 13:0.539541458576
8 14:0.487725156276
9 10:0.467598897591
9 11:0.417262376465
9 12:0.490210252201
9 13:0.292041581446
9 14:0.312361991364
10 11:0.549263009031
10 12:0.587645851156
10 13:0.330342845993
10 14:0.405098134727
11 12:0.314648049075
11 13:0.432630391804
11 14:0.300595559508
12 13:0.522539870531
12 14:0.307432510823
13 14:0.237247158321
</hsp>