sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A2259-A945
X
>3OHK-A2097-A952
X
>3OHJ-A2097-A952
X
>3OH7-A2097-A952
X
>3OH5-A2097-A952
X
>3R8S-A2260-A945
X
>2J03-A2144-A952
X
>2J01-A2144-A952
X
>3OI1-A2097-A952
X
>3OHZ-A2097-A952
X
</seq>
<hsp>
0 1:0.722962206481
0 2:0.720523077962
0 3:0.845854999002
0 4:0.854035506803
0 5:0.7817978196
0 6:0.975341380372
0 7:1.0
0 8:0.938645674016
0 9:0.968529594645
1 2:0.147612519307
1 3:0.599120875754
1 4:0.665802094788
1 5:0.594252198144
1 6:0.663151047405
1 7:0.667860163521
1 8:0.501328303885
1 9:0.601869990877
2 3:0.549319699074
2 4:0.589208109937
2 5:0.536933120332
2 6:0.58280186386
2 7:0.589612800676
2 8:0.49503703478
2 9:0.559853336781
3 4:0.156462962979
3 5:0.766889443256
3 6:0.650035682692
3 7:0.700982257371
3 8:0.47932712859
3 9:0.501249883479
4 5:0.767598264976
4 6:0.655064044741
4 7:0.706379214344
4 8:0.577110955685
4 9:0.562583702407
5 6:0.680836208706
5 7:0.717913946431
5 8:0.638150658493
5 9:0.576832810279
6 7:0.0845097968374
6 8:0.491589085067
6 9:0.461597878723
7 8:0.537153052495
7 9:0.520825042238
8 9:0.187785884203
</hsp>