sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-2739-2364
X
>2ZJR-X1573-X1914
X
>3U5F-6751-6361
X
>3F1G-A587-A283
X
>3F1E-A587-A283
X
>3R8O-A607-A291
X
>1XMQ-A587-A283
X
>2UUB-A587-A283
X
>2VQF-A587-A283
X
>2UXC-A587-A283
X
>3OHC-A587-A283
X
>2UUA-A587-A283
X
>3OHD-A587-A283
X
>2VQE-A587-A283
X
>1N32-A587-A283
X
>1FJG-A587-A283
X
</seq>
<hsp>
0 1:0.856456618714
0 2:0.137609548123
0 3:0.462826932156
0 4:0.462043648254
0 5:0.324382800451
0 6:0.485373415847
0 7:0.454702497533
0 8:0.556259792002
0 9:0.586111656281
0 10:0.480778555289
0 11:0.558631567117
0 12:0.48181489381
0 13:0.549587714125
0 14:0.449232692451
0 15:0.534629836686
1 2:0.875625084289
1 3:0.974144609481
1 4:0.974504969106
1 5:0.696401518491
1 6:0.896652107139
1 7:0.900138870514
1 8:1.0
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1 10:0.954605072427
1 11:0.941460332388
1 12:0.947069234577
1 13:0.972183525394
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1 15:0.967490713626
2 3:0.363328012711
2 4:0.362399165693
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2 6:0.395355277009
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3 10:0.13458119488
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3 12:0.145183815122
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8 10:0.17065969434
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9 10:0.194628676768
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11 15:0.129365061677
12 13:0.153276028177
12 14:0.0763442852545
12 15:0.128404092416
13 14:0.158806163716
13 15:0.12866950636
14 15:0.135107707763
</hsp>