sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VQF-A440-A460
X
>2VQE-A440-A460
X
>2J00-A440-A460
X
>2UUA-A440-A460
X
>2J02-A440-A460
X
>2UUB-A440-A460
X
>3OHY-A440-A460
X
>3OI0-A440-A460
X
>3OGE-A440-A460
X
>3OGY-A440-A460
X
>1XMQ-A440-A460
X
</seq>
<hsp>
0 1:0.262106917588
0 2:0.537380412211
0 3:0.326041636286
0 4:0.535455952189
0 5:0.425458076319
0 6:0.562023471483
0 7:0.550712493296
0 8:0.664845059394
0 9:0.66643933776
0 10:0.876515447995
1 2:0.408158165099
1 3:0.162690974063
1 4:0.404406189544
1 5:0.250186169478
1 6:0.419351794278
1 7:0.409754883769
1 8:0.516449356071
1 9:0.515176608209
1 10:0.846547790162
2 3:0.275941610997
2 4:0.0296682011729
2 5:0.284619934648
2 6:0.258554765661
2 7:0.260832681621
2 8:0.59759925728
2 9:0.60167703088
2 10:0.991145828958
3 4:0.272397649607
3 5:0.193907868056
3 6:0.353790221611
3 7:0.345115879396
3 8:0.544109547968
3 9:0.542710571882
3 10:0.888239058079
4 5:0.288781210529
4 6:0.248083103205
4 7:0.250219490503
4 8:0.582194345202
4 9:0.586231623238
4 10:0.974916321736
5 6:0.329355368535
5 7:0.319794165554
5 8:0.619963769015
5 9:0.619518233158
5 10:0.99999514285
6 7:0.0252363349503
6 8:0.453239780162
6 9:0.460593859129
6 10:0.930608259955
7 8:0.453879626278
7 9:0.46030410104
7 10:0.931638979025
8 9:0.0302681409564
8 10:0.713444716319
9 10:0.710777583613
</hsp>