sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J00-X1-A900
X
>3OGE-A1262-A1331
X
>2ZJR-X1297-X1262
X
>3OGY-A1262-A1331
X
>3OHD-A1262-A1331
X
>3D2X-A49-B59
X
>3OHC-A1262-A1331
X
>3OHY-A1262-A1331
X
>3OI0-A1262-A1331
X
>2J02-A1262-A1331
X
>2J00-A1262-A1331
X
</seq>
<hsp>
0 1:0.24852807837
0 2:0.486838199335
0 3:0.246752636297
0 4:0.266800726461
0 5:0.862835406447
0 6:0.267956580609
0 7:0.268351836808
0 8:0.268391075536
0 9:0.252222364809
0 10:0.252404683697
1 2:0.645821176137
1 3:0.00374757260533
1 4:0.0385467813249
1 5:0.987158919699
1 6:0.038134260555
1 7:0.0383346953282
1 8:0.0396873828773
1 9:0.101066988759
1 10:0.100414263138
2 3:0.644004056895
2 4:0.644882934468
2 5:0.668033627574
2 6:0.64622837273
2 7:0.646847201673
2 8:0.645898717195
2 9:0.580014534402
2 10:0.580446910094
3 4:0.0378703914899
3 5:0.98730645338
3 6:0.0376598340515
3 7:0.0391981934049
3 8:0.0404323493458
3 9:0.100081024227
3 10:0.0994206633564
4 5:0.999996495116
4 6:0.00300898166211
4 7:0.0362735088652
4 8:0.0355211876901
4 9:0.0984157345083
4 10:0.0974466077812
5 6:1.0
5 7:0.9960946778
5 8:0.995543451318
5 9:0.948433089549
5 10:0.949263718264
6 7:0.0364412392558
6 8:0.0358433562212
6 9:0.0988615459493
6 10:0.0978815151527
7 8:0.00346534973701
7 9:0.0992587840801
7 10:0.0985001807907
8 9:0.0989017902951
8 10:0.0981488568463
9 10:0.00224321378424
</hsp>