sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1743-A1723
X
>3OI1-A1744-A1724
X
>3OH7-A1744-A1724
X
>2ZJR-X1713-X1692
X
>3R8O-A449-A479
X
>2J03-A1744-A1724
X
>2J01-A1744-A1724
X
</seq>
<hsp>
0 1:0.434844439498
0 2:0.454715250544
0 3:0.840956016185
0 4:0.729444641143
0 5:0.336449397243
0 6:0.350024722092
1 2:0.133900587088
1 3:0.994271315122
1 4:0.598599065919
1 5:0.310861072171
1 6:0.31248391622
2 3:0.999989503879
2 4:0.618576818863
2 5:0.325747520494
2 6:0.316258123025
3 4:0.812991120524
3 5:0.707076856932
3 6:0.715919111492
4 5:0.533343279953
4 6:0.53075436119
5 6:0.0590174526384
</hsp>