sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHJ-A580-A2330
X
>3KNK-A580-A2405
X
>3KNI-A580-A2405
X
>3F1H-A589-A2484
X
>3F1F-A589-A2484
X
>3OHZ-A580-A2330
X
>2ZJR-X501-X2287
X
>3OI1-A580-A2330
X
>2J03-A580-A2377
X
>2J01-A580-A2377
X
</seq>
<hsp>
0 1:0.999991823687
0 2:0.4701728971
0 3:0.304252079418
0 4:0.311186471853
0 5:0.398144816128
0 6:0.962886859768
0 7:0.431322414527
0 8:0.432155344173
0 9:0.43527102638
1 2:0.843858678314
1 3:0.971604929861
1 4:0.970321063955
1 5:0.73334460387
1 6:0.485869963234
1 7:0.721292597472
1 8:0.961321424078
1 9:0.974806759802
2 3:0.460267818988
2 4:0.489443152965
2 5:0.391519952671
2 6:0.883085160358
2 7:0.427994378007
2 8:0.488679248058
2 9:0.509883275445
3 4:0.0432190575496
3 5:0.326201636057
3 6:0.869964586748
3 7:0.346330927506
3 8:0.34281306342
3 9:0.353581527359
4 5:0.325848213963
4 6:0.85755256196
4 7:0.339393465399
4 8:0.337447082641
4 9:0.347018384888
5 6:0.647830024198
5 7:0.0868016977135
5 8:0.269029908773
5 9:0.279821880648
6 7:0.613732554538
6 8:0.805997329986
6 9:0.816052651243
7 8:0.265420277195
7 9:0.279741130299
8 9:0.0358245571365
</hsp>