sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61577-61606
X
>3OH5-A1021-A1090
X
>3OH7-A1021-A1090
X
>3OHJ-A1021-A1090
X
>3OHK-A1021-A1090
X
>2J03-A1021-A1090
X
>2J01-A1021-A1090
X
</seq>
<hsp>
0 1:0.996157973914
0 2:0.999999609079
0 3:0.99168157109
0 4:0.995715971302
0 5:0.930467713246
0 6:0.932651787978
1 2:0.00811969319866
1 3:0.0984058408858
1 4:0.102531616761
1 5:0.159233985578
1 6:0.15448805071
2 3:0.0966183476246
2 4:0.100108885093
2 5:0.161418667023
2 6:0.156779874301
3 4:0.0104330294963
3 5:0.226688888766
3 6:0.223440291553
4 5:0.228888166201
4 6:0.225771295388
5 6:0.00702915395894
</hsp>