sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A1639-A1630
X
>3U5F-664-683
X
>3KNI-A1638-A1629
X
>2ZJR-X171-X175
X
>3R8T-A194-A198
X
>3F1H-A1717-A1708
X
>3F1F-A1717-A1708
X
</seq>
<hsp>
0 1:0.125397806594
0 2:0.0726844410301
0 3:0.961960423381
0 4:0.912088375872
0 5:0.0756730825933
0 6:0.0746591277957
1 2:0.116416477532
1 3:1.0
1 4:0.948237926872
1 5:0.116962057747
1 6:0.116565334107
2 3:0.92309790264
2 4:0.871397179492
2 5:0.0410520237856
2 6:0.042854427117
3 4:0.106823788088
3 5:0.924644227603
3 6:0.926647677115
4 5:0.875846643106
4 6:0.877960779578
5 6:0.00580502875689
</hsp>