sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VQF-A873-A790
X
>3F1E-A873-A790
X
>3F1G-A873-A790
X
>2UUA-A873-A790
X
>3OGE-A873-A790
X
>3OGY-A873-A790
X
>3OHD-A873-A790
X
>3OHC-A873-A790
X
</seq>
<hsp>
0 1:0.695138937443
0 2:0.681449068245
0 3:0.37276767158
0 4:0.860551589583
0 5:0.906636191815
0 6:1.0
0 7:0.954125361069
1 2:0.0762903484144
1 3:0.653833147492
1 4:0.55229358474
1 5:0.577196019309
1 6:0.720328270614
1 7:0.663175791548
2 3:0.611667763054
2 4:0.535116480593
2 5:0.551422552166
2 6:0.679172923857
2 7:0.623435076694
3 4:0.715486398617
3 5:0.73541804674
3 6:0.779256391792
3 7:0.738559906645
4 5:0.130382566999
4 6:0.382738362681
4 7:0.310227672405
5 6:0.268457416093
5 7:0.213359288737
6 7:0.106685136055
</hsp>