sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQO-01082-01197
X
>1VQL-01082-01197
X
>1VQP-01082-01197
X
>1VQM-01082-01197
X
>1VQK-01082-01197
X
>1VQN-01082-01197
X
>1VQ8-01082-01197
X
</seq>
<hsp>
0 1:0.553509961647
0 2:0.687162533037
0 3:0.893483214652
0 4:0.999980486557
0 5:0.624032622647
0 6:0.877589831076
1 2:0.44446242715
1 3:0.511576494558
1 4:0.901332143879
1 5:0.44282648487
1 6:0.564452474886
2 3:0.759064857723
2 4:0.70113339392
2 5:0.425708294138
2 6:0.654206905284
3 4:0.898158305525
3 5:0.548324467221
3 6:0.356990519218
4 5:0.64471356036
4 6:0.777664559197
5 6:0.500610579031
</hsp>