sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3RKF-C51-C23
X
>3RKF-A51-A23
X
>3RKF-B51-B23
X
>3LA5-A53-A25
X
>1Y26-X53-X25
X
>1U8D-A51-A23
X
>3DS7-B51-B23
X
>3G4M-A51-A23
X
>3GAO-A51-A23
X
>2EEU-A51-A23
X
>3GOT-A51-A23
X
>3GER-A51-A23
X
>3FO6-A51-A23
X
</seq>
<hsp>
0 1:0.582424519475
0 2:0.203596005222
0 3:0.835348507629
0 4:0.678684743606
0 5:0.807252474352
0 6:1.0
0 7:0.670724372414
0 8:0.887719294628
0 9:0.881135016687
0 10:0.884741838418
0 11:0.850628277808
0 12:0.909600084114
1 2:0.511620264048
1 3:0.441876923148
1 4:0.417592985545
1 5:0.521509694759
1 6:0.593151064122
1 7:0.44221010885
1 8:0.528895984998
1 9:0.444992126411
1 10:0.508319149084
1 11:0.474639600811
1 12:0.4979144005
2 3:0.704922164344
2 4:0.531177204423
2 5:0.677702910827
2 6:0.881037297771
2 7:0.533486007705
2 8:0.764550646896
2 9:0.748830291328
2 10:0.754379389645
2 11:0.714733154638
2 12:0.772558112202
3 4:0.252096729334
3 5:0.276873778439
3 6:0.303207846825
3 7:0.314950205694
3 8:0.259451216947
3 9:0.228480491612
3 10:0.22282157201
3 11:0.191449153607
3 12:0.21957466399
4 5:0.244811328372
4 6:0.424214600838
4 7:0.208344315473
4 8:0.313621607716
4 9:0.314068213272
4 10:0.306975781908
4 11:0.266994968967
4 12:0.31238972727
5 6:0.263408348292
5 7:0.207700080259
5 8:0.15705374779
5 9:0.240693652501
5 10:0.165747435729
5 11:0.154950878303
5 12:0.21213909034
6 7:0.392219977801
6 8:0.16434581921
6 9:0.205014332078
6 10:0.161649442937
6 11:0.200394209128
6 12:0.180262464587
7 8:0.252270363411
7 9:0.292794325073
7 10:0.271738027747
7 11:0.231804842195
7 12:0.288666023328
8 9:0.167311199389
8 10:0.109120874677
8 11:0.119963524661
8 12:0.130852220272
9 10:0.138934639312
9 11:0.116154419162
9 12:0.0772393116479
10 11:0.079030995306
10 12:0.102589848881
11 12:0.0819661328653
</hsp>