sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3PDR-X19-X20
X
>2J01-A914-A915
X
>2J03-A914-A915
X
>2QBZ-X19-X20
X
>3OWZ-B63-B64
X
>3OHK-A914-A915
X
>3OHJ-A914-A915
X
>3OWZ-A68-A69
X
>3OI1-A914-A915
X
>3R8S-A433-A434
X
>3OHZ-A914-A915
X
>3OH5-A914-A915
X
>3OH7-A914-A915
X
>1VBZ-B55-B56
X
</seq>
<hsp>
0 1:1.0
0 2:0.994513714888
0 3:0.22300767922
0 4:0.356332005247
0 5:0.617646158088
0 6:0.625100985932
0 7:0.238465904224
0 8:0.728765508995
0 9:0.538154878079
0 10:0.717185323809
0 11:0.810417779941
0 12:0.820522360767
0 13:0.519615404566
1 2:0.0278849385551
1 3:0.905441428463
1 4:0.829348944213
1 5:0.679767782104
1 6:0.675592467531
1 7:0.919931756139
1 8:0.695093067098
1 9:0.68008090668
1 10:0.709483549425
1 11:0.462602012296
1 12:0.463057088062
1 13:0.598215399436
2 3:0.897548205077
2 4:0.828050869572
2 5:0.684960063472
2 6:0.680909318918
2 7:0.916821394223
2 8:0.699706297039
2 9:0.672126921513
2 10:0.713568967821
2 11:0.465171579275
2 12:0.46424633459
2 13:0.590459294993
3 4:0.39644732782
3 5:0.626283903527
3 6:0.634358190373
3 7:0.325941964949
3 8:0.726064923763
3 9:0.436349303626
3 10:0.71469649567
3 11:0.726118024111
3 12:0.729974666226
3 13:0.478210848349
4 5:0.393788195616
4 6:0.39628320342
4 7:0.181539259209
4 8:0.527206861919
4 9:0.495345033227
4 10:0.520814413185
4 11:0.618096549236
4 12:0.634213230868
4 13:0.346435012644
5 6:0.0468070558202
5 7:0.447848272703
5 8:0.193945978872
5 9:0.497478375698
5 10:0.21142620255
5 11:0.447175110119
5 12:0.472432171185
5 13:0.431754546561
6 7:0.453250375431
6 8:0.183175075735
6 9:0.493454460293
6 10:0.197378953907
6 11:0.438978640538
6 12:0.466478488585
6 13:0.42206073657
7 8:0.550417909077
7 9:0.514726753524
7 10:0.537106506695
7 11:0.713821359989
7 12:0.727983947535
7 13:0.422246769256
8 9:0.572722692147
8 10:0.0467958821771
8 11:0.513426145296
8 12:0.537583171259
8 13:0.511135750681
9 10:0.574129107078
9 11:0.384375605096
9 12:0.381214398578
9 13:0.340493565702
10 11:0.530679376929
10 12:0.555382655609
10 13:0.510870207074
11 12:0.0491535874204
11 13:0.447107233571
12 13:0.451102861384
</hsp>