sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-6722-6721
X
>3U5B-2501-2500
X
>3R8T-A2688-A2687
X
>1N32-A1063-A1062
X
>3KNK-A2343-A2342
X
>3U5B-21479-21478
X
>3U5B-2303-2302
X
>3R8T-A2284-A2283
X
>3U5F-6300-6299
X
>3R8S-A2689-A2688
X
>3U5F-61491-61490
X
>1QBP-D7-D6
X
>3OXB-A18-A17
X
</seq>
<hsp>
0 1:0.0882685178947
0 2:0.164416144196
0 3:0.837125489036
0 4:0.196956635202
0 5:0.260630538866
0 6:0.187627394518
0 7:0.261168939757
0 8:0.132689257856
0 9:0.144212830913
0 10:0.330990173575
0 11:0.224339488852
0 12:0.652691513917
1 2:0.19470523875
1 3:0.876936593324
1 4:0.152927493362
1 5:0.281255300596
1 6:0.210004761395
1 7:0.212144654078
1 8:0.166666373074
1 9:0.177392928846
1 10:0.357210736663
1 11:0.252205124932
1 12:0.698304610216
2 3:0.7869769373
2 4:0.324261560674
2 5:0.125513147247
2 6:0.0781252196849
2 7:0.396366931158
2 8:0.0742978375313
2 9:0.0730966818014
2 10:0.183983099575
2 11:0.0944726022695
2 12:0.627615499868
3 4:0.965198049867
3 5:0.753620626012
3 6:0.765880950108
3 7:1.0
3 8:0.786975001613
3 9:0.809580863386
3 10:0.715203934218
3 11:0.780628919928
3 12:0.24384134483
4 5:0.423558053123
4 6:0.327837103172
4 7:0.0918813527004
4 8:0.28128645046
4 9:0.291394844695
4 10:0.492596221228
4 11:0.378038674635
4 12:0.777962155253
5 6:0.142739545403
5 7:0.486098236439
5 8:0.171492382885
5 9:0.162099516183
5 10:0.0947922692835
5 11:0.0937370103638
5 12:0.607690310705
6 7:0.397864526988
6 8:0.0633634283058
6 9:0.0785140551925
6 10:0.177382902233
6 11:0.0912824749539
6 12:0.601200003364
7 8:0.353836009714
7 9:0.364879621634
7 10:0.557126625583
7 11:0.445253681662
7 12:0.811073956969
8 9:0.0453112220855
8 10:0.2227081303
8 11:0.116073059426
8 12:0.614659920352
9 10:0.215494687698
9 11:0.0974995346709
9 12:0.637881927055
10 11:0.131323358636
10 12:0.583019250964
11 12:0.621243814001
</hsp>