sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A819-A818
X
>3OH5-A819-A818
X
>3F1F-A831-A830
X
>3F1H-A831-A830
X
>3OHJ-A819-A818
X
>3OHK-A819-A818
X
>3CUN-C46-C45
X
>1YIT-01950-01949
X
</seq>
<hsp>
0 1:0.0825635242414
0 2:0.194279364816
0 3:0.223202206501
0 4:0.195514611783
0 5:0.167956918828
0 6:0.781250201778
0 7:0.976505349164
1 2:0.177459275529
1 3:0.201610623141
1 4:0.162137037514
1 5:0.156129193989
1 6:0.76675638089
1 7:0.950523408658
2 3:0.0436279668169
2 4:0.171834700646
2 5:0.158427992897
2 6:0.83841356784
2 7:0.999997184289
3 4:0.188657237168
3 5:0.177521538105
3 6:0.833128733388
3 7:0.987590615907
4 5:0.0570974853779
4 6:0.75372194366
4 7:0.904061934005
5 6:0.759559349216
5 7:0.91196571823
6 7:0.447698153374
</hsp>