sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1KUQ-B9-B8
X
>3KNI-A1633-A1632
X
>3BOY-D13-D12
X
>2HW8-B15-B14
X
>3G9C-P40-P39
X
>1ZHO-B16-B15
X
>1I6U-C17-C16
X
</seq>
<hsp>
0 1:0.256425162462
0 2:0.939479373471
0 3:0.131861230605
0 4:0.197824098937
0 5:0.252200937461
0 6:0.257829575401
1 2:0.848958885275
1 3:0.173653946185
1 4:0.177136886414
1 5:0.144387142128
1 6:0.164488911978
2 3:0.895077791294
2 4:1.0
2 5:0.792948868706
2 6:0.81439072917
3 4:0.170160165044
3 5:0.183599845173
3 6:0.183778104397
4 5:0.23212530023
4 6:0.234735303163
5 6:0.0991474913674
</hsp>