sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2EES-A36-A35
X
>3R8O-A1535-A1534
X
>3NDB-M3-M2
X
>3KNI-A1516-A1515
X
>3KNI-A1830-A1829
X
>3U5H-52069-52068
X
>3AMT-B65-B64
X
>1M5V-B79-B78
X
>3R8O-A474-A473
X
>301D-B9-B8
X
>3R8N-A474-A473
X
</seq>
<hsp>
0 1:0.266750293192
0 2:0.363362546612
0 3:0.250142008899
0 4:0.864886362023
0 5:0.17843279611
0 6:0.34778945475
0 7:0.518408491138
0 8:0.460291186672
0 9:0.499639782117
0 10:0.414947597423
1 2:0.134976583265
1 3:0.102574207576
1 4:0.929758298733
1 5:0.197080875815
1 6:0.21858678919
1 7:0.318395067425
1 8:0.281523521439
1 9:0.322585559705
1 10:0.193361698973
2 3:0.146338740103
2 4:0.942486684199
2 5:0.273863655012
2 6:0.151404106328
2 7:0.218992968439
2 8:0.194005912125
2 9:0.237522446104
2 10:0.146395088496
3 4:0.933519891292
3 5:0.227615800803
3 6:0.175675208109
3 7:0.297707877663
3 8:0.239258988652
3 9:0.284409658001
3 10:0.175494931239
4 5:0.841838896485
4 6:0.905260797873
4 7:0.991209059564
4 8:0.978474246549
4 9:0.989219415342
4 10:1.0
5 6:0.284281061942
5 7:0.434238302287
5 8:0.394517056177
5 9:0.431936638175
5 10:0.355495713405
6 7:0.214518742227
6 8:0.166849263848
6 9:0.213638273451
6 10:0.216428838862
7 8:0.0971134558823
7 9:0.103281099883
7 10:0.195601466128
8 9:0.0600813796433
8 10:0.150177613872
9 10:0.175224292732
</hsp>