sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A2019-A2018
X
>3F1H-A914-A913
X
>3F1F-A914-A913
X
>3R8N-A1535-A1534
X
>3HL2-E41-E40
X
>3KNH-W33-W32
X
>3F1G-Z24-Z23
X
>3F1E-Z24-Z23
X
</seq>
<hsp>
0 1:0.421651429053
0 2:0.42003539304
0 3:0.633455700795
0 4:0.492058496846
0 5:0.66615594576
0 6:0.513629476464
0 7:0.509554750637
1 2:0.0164762768144
1 3:0.264889300032
1 4:0.502407990285
1 5:0.90247411413
1 6:0.72952856998
1 7:0.727812965069
2 3:0.258334409257
2 4:0.505797157088
2 5:0.893470255635
2 6:0.724015229864
2 7:0.722424708055
3 4:0.636331449685
3 5:1.0
3 6:0.859827773685
3 7:0.860259748596
4 5:0.79954053959
4 6:0.51647777131
4 7:0.515291721406
5 6:0.308631312495
5 7:0.311212989543
6 7:0.00981804319524
</hsp>