sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2457-A2456
X
>1L8V-A134-A133
X
>1L8V-B134-B133
X
>3A6P-D21-D20
X
>3A6P-I21-I20
X
>3EPH-F1-F0
X
>1FJG-A44-A43
X
</seq>
<hsp>
0 1:0.702281626127
0 2:0.702800669557
0 3:0.28302227515
0 4:0.2746991263
0 5:0.760888422677
0 6:0.999998892888
1 2:0.00115812269194
1 3:0.482097092433
1 4:0.486250397285
1 5:0.118325213171
1 6:0.484915068259
2 3:0.482690472685
2 4:0.486842541118
2 5:0.118233057273
2 6:0.484765746644
3 4:0.0160478679596
3 5:0.535809560851
3 6:0.78098315673
4 5:0.541876503955
4 6:0.781029970724
5 6:0.517026158049
</hsp>