sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3IVN-A20-A19
X
>3CCJ-938-937
X
>3R8T-A2506-A2505
X
>3R8N-A222-A221
X
>3R8T-A2147-A2146
X
>3R8O-A705-A704
X
>3R8O-V31-V30
X
>2ZJR-X1956-X1955
X
</seq>
<hsp>
0 1:0.88646011836
0 2:0.231738650219
0 3:0.439090534291
0 4:0.354393128527
0 5:0.186256946423
0 6:0.233393299002
0 7:0.163234973311
1 2:0.739748348094
1 3:0.49949158552
1 4:0.621967912725
1 5:0.999998476449
1 6:0.953675292885
1 7:0.790308263337
2 3:0.293475783441
2 4:0.242059464898
2 5:0.302881063754
2 6:0.310278792611
2 7:0.183393604841
3 4:0.205096214136
3 5:0.563245488032
3 6:0.52916949195
3 7:0.352982837635
4 5:0.462511758229
4 6:0.408064831723
4 7:0.254843846801
5 6:0.180712350369
5 7:0.269198177325
6 7:0.207932367457
</hsp>