sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A3-A2
X
>3OH5-A3-A2
X
>3F1G-Z36-Z35
X
>3OHK-A3-A2
X
>3OHJ-A3-A2
X
>3DS7-B33-B32
X
</seq>
<hsp>
0 1:0.0197347315758
0 2:0.253986095074
0 3:0.221285757663
0 4:0.22123472253
0 5:0.970914029375
1 2:0.24394638128
1 3:0.219922916639
1 4:0.218758902336
1 5:0.977650252911
2 3:0.389812836518
2 4:0.384455787445
2 5:0.999999329356
3 4:0.0136422012262
3 5:0.99451870665
4 5:0.999032177134
</hsp>