sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1G-A915-A914
X
>3F1E-A915-A914
X
>3OHD-A549-A548
X
>3OHY-A549-A548
X
>1GID-A32-A31
X
>1GID-A140-A139
X
>2J00-A558-A557
X
>2VQF-A915-A914
X
>2J00-A604-A603
X
>1XMQ-A915-A914
X
>3F1H-A2869-A2868
X
>2J02-A604-A603
X
>3KNH-X54-X53
X
>3R8T-A1191-A1190
X
>3R8S-A1477-A1476
X
</seq>
<hsp>
0 1:0.014830554403
0 2:0.465374742789
0 3:0.433472201228
0 4:0.755962199359
0 5:0.527929514055
0 6:0.835178903741
0 7:0.737207486459
0 8:0.682638387645
0 9:0.604117282683
0 10:0.55183116362
0 11:0.663378897847
0 12:0.516168020484
0 13:0.577024961196
0 14:0.737369792461
1 2:0.464111994484
1 3:0.433252264668
1 4:0.756400629177
1 5:0.531313473478
1 6:0.843651243682
1 7:0.740066813822
1 8:0.68505696864
1 9:0.606995923958
1 10:0.550170993149
1 11:0.665650351666
1 12:0.512471969975
1 13:0.574577400719
1 14:0.742173819181
2 3:0.13070203423
2 4:0.461650691681
2 5:0.367674436924
2 6:0.955553613755
2 7:0.964485885275
2 8:0.574093165537
2 9:0.846826941654
2 10:0.486406927381
2 11:0.550614493332
2 12:0.402515909904
2 13:0.398802459025
2 14:0.699841863101
3 4:0.459320279514
3 5:0.326360743021
3 6:0.930665672926
3 7:0.945966542304
3 8:0.555616273695
3 9:0.836123514507
3 10:0.460626386021
3 11:0.535278629158
3 12:0.377527175136
3 13:0.399265560003
3 14:0.713312474722
4 5:0.312520741956
4 6:0.858324318703
4 7:0.927468965679
4 8:0.301447416892
4 9:0.89465286633
4 10:0.363811825755
4 11:0.29368358095
4 12:0.374244817065
4 13:0.442580137856
4 14:0.591904659567
5 6:0.67702215442
5 7:0.774782591048
5 8:0.301540580087
5 9:0.717644188734
5 10:0.335307842043
5 11:0.286781551036
5 12:0.334931548474
5 13:0.462876147142
5 14:0.520937540497
6 7:0.463021283544
6 8:0.618770775264
6 9:0.517658878262
6 10:0.761256749407
6 11:0.619086887745
6 12:0.862647700443
6 13:0.999999816335
6 14:0.461377177783
7 8:0.674889103915
7 9:0.231241070679
7 10:0.688645657257
7 11:0.668841418445
7 12:0.793880645566
7 13:0.963496391525
7 14:0.532857706048
8 9:0.692341122907
8 10:0.247436001199
8 11:0.0332167162591
8 12:0.354580329255
8 13:0.490983607197
8 14:0.436724376818
9 10:0.683226498469
9 11:0.677709715179
9 12:0.763192636048
9 13:0.920489432076
9 14:0.493348350502
10 11:0.238110227676
10 12:0.147351489476
10 13:0.346869054854
10 14:0.564216590211
11 12:0.342439938732
11 13:0.479928561063
11 14:0.419098465113
12 13:0.27029192295
12 14:0.661823155834
13 14:0.777263030002
</hsp>