sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1G-A355-A41
X
>3F1E-A355-A41
X
>3OGY-A355-A41
X
>3OGE-A355-A41
X
>2J02-A355-A41
X
>2J00-A355-A41
X
>3OHD-A355-A41
X
>3KNH-A923-A1189
X
>1FJG-A355-A41
X
>2UUA-A355-A41
X
>2UUB-A355-A41
X
>2VQE-A355-A41
X
</seq>
<hsp>
0 1:0.021442770456
0 2:0.558365894683
0 3:0.550626493439
0 4:0.522601375594
0 5:0.521272877639
0 6:0.598776327954
0 7:0.669750452609
0 8:0.243041288823
0 9:0.388512696337
0 10:0.43032233625
0 11:0.464353868955
1 2:0.553773076246
1 3:0.545536457143
1 4:0.517940242573
1 5:0.516371692271
1 6:0.592666077535
1 7:0.664100639868
1 8:0.232051760337
1 9:0.378185516308
1 10:0.418319504005
1 11:0.453797354984
2 3:0.0296682591293
2 4:0.290103319785
2 5:0.27914601916
2 6:0.12656193375
2 7:1.0
2 8:0.472703000114
2 9:0.365752392948
2 10:0.494072059844
2 11:0.397587508957
3 4:0.289874578016
3 5:0.277787725318
3 6:0.128092801249
3 7:0.996355827737
3 8:0.464180646786
3 9:0.358025714572
3 10:0.487079997128
3 11:0.392781805175
4 5:0.0271894474356
4 6:0.318743363298
4 7:0.957543862186
4 8:0.358408442652
4 9:0.223016334618
4 10:0.320551852917
4 11:0.236514650794
5 6:0.310450310822
5 7:0.964306264492
5 8:0.356624504275
5 9:0.222305740145
5 10:0.323951613733
5 11:0.238275529377
6 7:0.990439282187
6 8:0.511736164405
6 9:0.379653781436
6 10:0.498202927472
6 11:0.394267417096
7 8:0.720649662924
7 9:0.780815925855
7 10:0.771699114698
7 11:0.826579458837
8 9:0.189154652543
8 10:0.216547332218
8 11:0.265817352585
9 10:0.148569926615
9 11:0.11386181319
10 11:0.124114262873
</hsp>