sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ7-0453-0452
X
>3CCR-0453-0452
X
>3CCJ-0453-0452
X
>3OH5-A1261-A1260
X
>3I56-0941-0940
X
>3OH7-A1261-A1260
X
>3KNI-A473-A472
X
>3OHZ-A1261-A1260
X
>3OI1-A1261-A1260
X
</seq>
<hsp>
0 1:0.167294417738
0 2:0.343203148943
0 3:0.642210459666
0 4:0.475907537355
0 5:0.634943815321
0 6:0.672753880544
0 7:0.503213633738
0 8:0.49658479379
1 2:0.325680736451
1 3:0.586679725504
1 4:0.556073628971
1 5:0.586364171627
1 6:0.731959915131
1 7:0.481043613085
1 8:0.481986478153
2 3:0.71362958711
2 4:0.60075309713
2 5:0.724582273875
2 6:0.964842611568
2 7:0.634128644554
2 8:0.649831472569
3 4:0.707054494032
3 5:0.0757544573518
3 6:1.0
3 7:0.341858514617
3 8:0.34711278516
4 5:0.686990992159
4 6:0.661246591595
4 7:0.535013472253
4 8:0.517691724583
5 6:0.980217599968
5 7:0.294305044155
5 8:0.300772167107
6 7:0.867494960438
6 8:0.829552786163
7 8:0.0578379303391
</hsp>