sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2H0W-B44-B43
X
>2H0X-B44-B43
X
>2GCS-B44-B43
X
>2HO7-B44-B43
X
>2H0S-B44-B43
X
>2HO6-B44-B43
X
>3KNK-A1141-A1140
X
>2QA4-01251-01250
X
</seq>
<hsp>
0 1:0.057157508918
0 2:0.0585024598863
0 3:0.098773641473
0 4:0.105880610827
0 5:0.0729205921933
0 6:0.905315710733
0 7:1.0
1 2:0.0121714120482
1 3:0.0790464963521
1 4:0.0735294669601
1 5:0.087100568775
1 6:0.875273197033
1 7:0.968852293505
2 3:0.0797389278749
2 4:0.0727086448776
2 5:0.0917028736166
2 6:0.881314559538
2 7:0.976266989886
3 4:0.0431048609798
3 5:0.0648846837906
3 6:0.877078276312
3 7:0.95889187121
4 5:0.0952467734308
4 6:0.854166259595
4 7:0.944158643307
5 6:0.899325811182
5 7:0.977480439248
6 7:0.253655965427
</hsp>