sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ4-01847-01846
X
>3CCR-01847-01846
X
>3R8T-A1826-A1825
X
>1YI2-01847-01846
X
>1YJ9-01847-01846
X
>3OI1-A992-A1133
X
>2OTL-01847-01846
X
>1VQK-0713-0712
X
</seq>
<hsp>
0 1:0.363177422873
0 2:0.460561300699
0 3:0.131390124251
0 4:0.22672234054
0 5:0.730002342178
0 6:0.215007298862
0 7:0.623323869781
1 2:0.412640676819
1 3:0.434722106573
1 4:0.505148570083
1 5:0.756581142969
1 6:0.356626093964
1 7:0.598166264461
2 3:0.50355276612
2 4:0.558606455902
2 5:0.999995030199
2 6:0.483435890011
2 7:0.88757535194
3 4:0.105350736623
3 5:0.665601428459
3 6:0.211893161531
3 7:0.583523126087
4 5:0.614220784309
4 6:0.279121100056
4 7:0.577292692446
5 6:0.721318107877
5 7:0.402562059792
6 7:0.533590018266
</hsp>