sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1F-A1236-A1235
X
>3OH7-A26-A25
X
>1VQM-0693-0692
X
>1VQ4-0693-0692
X
>3CXC-01851-01850
X
>1YIJ-01602-01601
X
>2ZJR-X2327-X2326
X
</seq>
<hsp>
0 1:0.752901157233
0 2:0.920889142614
0 3:0.628889484921
0 4:0.679825666958
0 5:0.607424111255
0 6:0.62591131681
1 2:1.0
1 3:0.918102598322
1 4:0.773077598922
1 5:0.792409296295
1 6:0.587841501602
2 3:0.421044661165
2 4:0.584756869147
2 5:0.436368615102
2 6:0.615995246161
3 4:0.541797742365
3 5:0.405447733422
3 6:0.598560793355
4 5:0.231193348636
4 6:0.326676808453
5 6:0.324453913902
</hsp>