sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3DIO-X67-X125
X
>3DIZ-A67-A125
X
>3DIL-A67-A125
X
>3DJ2-A67-A125
X
>3DIR-A67-A125
X
>3DJ0-A67-A125
X
>3DIQ-A67-A125
X
>3DIX-A67-A125
X
>3DIY-A67-A125
X
>3DIM-A67-A125
X
>3DIG-X67-X125
X
</seq>
<hsp>
0 1:0.476465857744
0 2:0.475960091093
0 3:0.25088621136
0 4:1.0
0 5:0.604922124268
0 6:0.428166488241
0 7:0.801372110396
0 8:0.74336943985
0 9:0.71113735373
0 10:0.617600101819
1 2:0.315777589046
1 3:0.470921555803
1 4:0.787175018826
1 5:0.40904406222
1 6:0.333875347529
1 7:0.555164794071
1 8:0.495312504923
1 9:0.544668963014
1 10:0.517625212501
2 3:0.3602783236
2 4:0.777775973468
2 5:0.25616285791
2 6:0.2339696593
2 7:0.461678636157
2 8:0.411372544915
2 9:0.425647716256
2 10:0.480752102193
3 4:0.858948602722
3 5:0.489734099596
3 6:0.284695028516
3 7:0.649331843416
3 8:0.6393916412
3 9:0.560872859741
3 10:0.493124965712
4 5:0.7064923223
4 6:0.657083156974
4 7:0.549859571623
4 8:0.589634364522
4 9:0.465519012527
4 10:0.481890664076
5 6:0.295456726937
5 7:0.275079777475
5 8:0.209656204441
5 9:0.40244619114
5 10:0.491471929928
6 7:0.413160858103
6 8:0.40063067192
6 9:0.321436091266
6 10:0.297748963811
7 8:0.210913765256
7 9:0.363506852057
7 10:0.46655782953
8 9:0.359692323292
8 10:0.471739287991
9 10:0.219862344085
</hsp>