sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ4-0209-0153
X
>1YJ9-0209-0153
X
>1FFK-0208-0152
X
>1VQK-0209-0153
X
>3CCQ-0209-0153
X
>2OTL-0209-0153
X
>3CCE-0209-0153
X
>3G71-0209-0153
X
>1VQ6-0209-0153
X
>1YIJ-0209-0153
X
>1YJN-0209-0153
X
>1JJ2-0209-0153
X
>1YIT-0209-0153
X
>3CC2-0209-0153
X
</seq>
<hsp>
0 1:0.372534349223
0 2:0.337285845268
0 3:0.402715572263
0 4:0.64309250829
0 5:0.482824052473
0 6:0.679603922876
0 7:0.847812636917
0 8:0.573546611865
0 9:0.37290204003
0 10:0.634699180921
0 11:0.521434339203
0 12:0.500683196083
0 13:0.437878967839
1 2:0.574775989305
1 3:0.462988193319
1 4:0.586654253998
1 5:0.257991077337
1 6:0.45924386336
1 7:0.705896626059
1 8:0.484960639071
1 9:0.347949158042
1 10:0.484498577383
1 11:0.629563157833
1 12:0.382205385945
1 13:0.508602796126
2 3:0.518088483543
2 4:0.834043041125
2 5:0.653624435377
2 6:0.859914019408
2 7:1.0
2 8:0.770627184397
2 9:0.54494439466
2 10:0.78366878844
2 11:0.502101257621
2 12:0.610564726176
2 13:0.460731528552
3 4:0.362688629899
3 5:0.345111797336
3 6:0.454632827145
3 7:0.622150806981
3 8:0.335885812957
3 9:0.405232566818
3 10:0.371196001302
3 11:0.36005182829
3 12:0.40887124365
3 13:0.338327709715
4 5:0.432537164542
4 6:0.338090122493
4 7:0.371352697681
4 8:0.189305893009
4 9:0.530363611548
4 10:0.359135100282
4 11:0.618246225137
4 12:0.526370038621
4 13:0.582807576772
5 6:0.275617843272
5 7:0.593330485245
5 8:0.324017778903
5 9:0.320386078921
5 10:0.236813735132
5 11:0.510585254083
5 12:0.264248795936
5 13:0.413807070425
6 7:0.396273441893
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6 9:0.519109044547
6 10:0.253236282809
6 11:0.673630896382
6 12:0.471432194013
6 13:0.605832975309
7 8:0.379902109189
7 9:0.716338520252
7 10:0.549755065551
7 11:0.846856516775
7 12:0.70533593667
7 13:0.794249204276
8 9:0.426644218437
8 10:0.275306319623
8 11:0.556698111986
8 12:0.44266537986
8 13:0.500355756725
9 10:0.411009247697
9 11:0.409306470218
9 12:0.205411362575
9 13:0.277525382533
10 11:0.482614617122
10 12:0.321896635493
10 13:0.430709763663
11 12:0.391816534416
11 13:0.148246533465
12 13:0.281689413261
</hsp>