sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2360-A1946
X
>3OH5-A2346-A1077
X
>3OHC-A1497-A744
X
>2J00-A1497-A744
X
>3OHY-A90-A140
X
>3OI0-A90-A140
X
>3F1G-A1497-A744
X
>2UUB-A1497-A744
X
>2VQF-A1497-A744
X
>1XMQ-A90-A140
X
>2UUB-A90-A140
X
</seq>
<hsp>
0 1:0.392628905849
0 2:0.925405306598
0 3:0.962089712365
0 4:0.6979818505
0 5:0.699872323081
0 6:0.848481057633
0 7:0.914371584064
0 8:0.900996803309
0 9:0.764007120623
0 10:0.727648173005
1 2:0.918455108035
1 3:1.0
1 4:0.851072543518
1 5:0.851207229371
1 6:0.903101773839
1 7:0.913648478096
1 8:0.9140854767
1 9:0.858558785046
1 10:0.871942662291
2 3:0.161603335599
2 4:0.390479117049
2 5:0.3866550513
2 6:0.188949980139
2 7:0.181607248502
2 8:0.162035635289
2 9:0.348510108255
2 10:0.390407851839
3 4:0.371848227393
3 5:0.36854938614
3 6:0.219437810578
3 7:0.162100203704
3 8:0.132517948853
3 9:0.387149331054
3 10:0.381688714119
4 5:0.00822543188059
4 6:0.251339494276
4 7:0.407040638396
4 8:0.370444277185
4 9:0.198137832516
4 10:0.103745360387
5 6:0.247363605412
5 7:0.403742116657
5 8:0.366945869711
5 9:0.193492629451
5 10:0.100910053766
6 7:0.240190428779
6 8:0.214462577662
6 9:0.218532624247
6 10:0.235871291487
7 8:0.0580974435209
7 9:0.401174929207
7 10:0.408839229724
8 9:0.366614767566
8 10:0.373908000753
9 10:0.155477939377
</hsp>