sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A517-A514
X
>3R8N-A517-A514
X
>3KNI-A1678-A2622
X
>3U5F-6562-6559
X
>2UUA-A497-A494
X
>3F1H-A1757-A2701
X
>3F1F-A1757-A2701
X
>3U5B-2565-2562
X
>2VQE-A497-A494
X
>2VQF-A497-A494
X
>1N32-A497-A494
X
>1XMQ-A497-A494
X
>2UXC-A497-A494
X
>1FJG-A497-A494
X
</seq>
<hsp>
0 1:0.382440575193
0 2:0.834586087593
0 3:0.641868949405
0 4:1.0
0 5:0.887155543578
0 6:0.862612277257
0 7:0.52784446404
0 8:0.664870532946
0 9:0.640189827085
0 10:0.44102419223
0 11:0.629279374462
0 12:0.549548386413
0 13:0.442089738824
1 2:0.838471119222
1 3:0.542847865753
1 4:0.800547218882
1 5:0.772702836331
1 6:0.739910396932
1 7:0.459642001641
1 8:0.669808148104
1 9:0.559311773833
1 10:0.194667675775
1 11:0.478654773385
1 12:0.594771156913
1 13:0.398713320684
2 3:0.596796961387
2 4:0.980544316173
2 5:0.387146070882
2 6:0.379033337464
2 7:0.489474830075
2 8:0.457007104048
2 9:0.614706848241
2 10:0.77667028695
2 11:0.767099639467
2 12:0.480808329383
2 13:0.635385962901
3 4:0.558652268032
3 5:0.520810232885
3 6:0.510776610687
3 7:0.270966505792
3 8:0.316678481646
3 9:0.192693783604
3 10:0.442029803045
3 11:0.233828819149
3 12:0.340682267581
3 13:0.289693781996
4 5:0.702969870957
4 6:0.714729899675
4 7:0.649914526589
4 8:0.639016657063
4 9:0.475427140017
4 10:0.765842083524
4 11:0.449622899977
4 12:0.703294022197
4 13:0.684445414309
5 6:0.0532163378165
5 7:0.443478152726
5 8:0.401725272254
5 9:0.476950262026
5 10:0.710736799019
5 11:0.620644938809
5 12:0.452328304381
5 13:0.581543167391
6 7:0.42664041602
6 8:0.412504109117
6 9:0.47780374175
6 10:0.67654397342
6 11:0.610734937153
6 12:0.451333593195
6 13:0.56180820532
7 8:0.263607928176
7 9:0.24552804903
7 10:0.415361604994
7 11:0.364366252389
7 12:0.274069552006
7 13:0.293056092282
8 9:0.222365582874
8 10:0.612767893912
8 11:0.432232677634
8 12:0.173852469186
8 13:0.380907268366
9 10:0.490443594064
9 11:0.224396974178
9 12:0.27346251042
9 13:0.294575893047
10 11:0.385933765189
10 12:0.534531916577
10 13:0.291001768672
11 12:0.423495244251
11 13:0.273845310571
12 13:0.285443082365
</hsp>