ClaRNA

Doublet Group info: classifier/stacking/></GC/sub-006

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></GC/sub-006
Members:
count: 32
download members
3R8N:A175:A174
3U5F:61449:61450
3R1D:E5:E4
3R1C:F2:F1
3U5B:21437:21438
3R1C:G2:G1
3R8O:A175:A174
3R1C:L2:L1
3R1C:I2:I1
3R1C:M5:M4
3R1C:F5:F4
3R1C:Z5:Z4
3R1C:G5:G4
3R1C:S5:S4
3R1C:V5:V4
3R1C:A5:A4
3R1C:X2:X1
3R1C:C2:C1
3R1C:J2:J1
3R1C:K2:K1
3R1C:Q5:Q4
3R1C:D2:D1
3R1C:N5:N4
3R1C:B5:B4
3R1C:R5:R4
3SJ2:A7:A6
3R1D:D5:D4
3R1C:U5:U4
3R1C:O5:O4
3SJ2:A10:A9
3R1C:P5:P4
3R1C:T5:T4
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>< 11 0.076
stacking/<< 1 0.089
base-phosphate/W_3BPh 3 0.101
base-ribose/W_5BR 4 0.101
stacking/>> 15 0.113
base-ribose/W_3BR 16 0.145
base-ribose/W_4BR 12 0.146
base-phosphate/S_1BPh 6 0.149
base-ribose/W_6BR 4 0.215
base-ribose/H_7BR 4 0.242

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol