sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A528-A516
X
>3R8N-A528-A516
X
>1FJG-A508-A496
X
>3KNH-A690-A689
X
>1N32-A1041-A1040
X
>3OGE-A1041-A1040
X
>3OGY-A1041-A1040
X
>3OHC-A1041-A1040
X
>3OHD-A1041-A1040
X
>3OI0-A1041-A1040
X
>3OHY-A1041-A1040
X
>3F1G-A1041-A1040
X
>3F1E-A1041-A1040
X
</seq>
<hsp>
0 1:0.29408820243
0 2:0.154955231766
0 3:0.999999889249
0 4:0.677429166994
0 5:0.544867416958
0 6:0.544297324978
0 7:0.604220204638
0 8:0.604364246154
0 9:0.509733581273
0 10:0.508939440648
0 11:0.566332519001
0 12:0.568122255446
1 2:0.266690378074
1 3:0.842298559551
1 4:0.611119875833
1 5:0.607019433807
1 6:0.60371359686
1 7:0.638720526623
1 8:0.636411583759
1 9:0.503468656857
1 10:0.503159404698
1 11:0.530545049042
1 12:0.527776865203
2 3:0.955359260118
2 4:0.614657327195
2 5:0.517920750521
2 6:0.519248239362
2 7:0.584794216779
2 8:0.585172243434
2 9:0.456826574443
2 10:0.454632085176
2 11:0.498334321451
2 12:0.495981173852
3 4:0.470127761127
3 5:0.698940358827
3 6:0.692201995957
3 7:0.634904846078
3 8:0.628853447243
3 9:0.651342809564
3 10:0.651136376219
3 11:0.593733896219
3 12:0.593504047403
4 5:0.293810027616
4 6:0.292193504787
4 7:0.28612760262
4 8:0.285856335128
4 9:0.261620303803
4 10:0.255170318579
4 11:0.193503238405
4 12:0.195690753047
5 6:0.0171426820269
5 7:0.12749245411
5 8:0.135560396683
5 9:0.19864266395
5 10:0.193270192487
5 11:0.233222788583
5 12:0.246195668025
6 7:0.119579839559
6 8:0.126931467949
6 9:0.195045930204
6 10:0.190373794952
6 11:0.232650151627
6 12:0.246251776132
7 8:0.0154863747687
7 9:0.199191693898
7 10:0.200119973702
7 11:0.227250627711
7 12:0.241883140989
8 9:0.19808338513
8 10:0.199619189306
8 11:0.226146071995
8 12:0.241024270493
9 10:0.0150833396157
9 11:0.0951609793744
9 12:0.108812412503
10 11:0.0907309414383
10 12:0.104625364598
11 12:0.0228062148056
</hsp>