sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OXE-A31-A30
X
>3OWZ-B26-B25
X
>3OWW-B30-B29
X
>3OXM-B31-B30
X
>3OXM-A31-A30
X
>3OWI-B31-B30
X
>3OWW-A31-A30
X
>3OXB-B36-B37
X
>3KNI-A148-A149
X
>3HL2-E79-E78
X
</seq>
<hsp>
0 1:0.177444200103
0 2:0.139368271389
0 3:0.123694322666
0 4:0.0563868026925
0 5:0.149028196797
0 6:0.140848693568
0 7:0.723314904855
0 8:0.710565774686
0 9:0.975058685815
1 2:0.142425832814
1 3:0.16467369748
1 4:0.148413425824
1 5:0.146004124463
1 6:0.124353004436
1 7:0.616311064507
1 8:0.687070448605
1 9:1.0
2 3:0.0432289083776
2 4:0.131689600902
2 5:0.0480977476016
2 6:0.106296887244
2 7:0.613518618053
2 8:0.617211126442
2 9:0.910831836927
3 4:0.12260650848
3 5:0.0482787727868
3 6:0.119106420686
3 7:0.636304425786
3 8:0.617422205857
3 9:0.894679662852
4 5:0.136061996903
4 6:0.102205378409
4 7:0.687251536494
4 8:0.682535787725
4 9:0.958354285699
5 6:0.115517499002
5 7:0.598369137534
5 8:0.607971338909
5 9:0.895370873249
6 7:0.602271661819
6 8:0.60957052289
6 9:0.936758956361
7 8:0.494410272921
7 9:0.93248167472
8 9:0.581072021295
</hsp>