ClaRNA

Doublet Group info: classifier/stacking/></GA/sub-007

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></GA/sub-007
Members:
count: 27
download members
3U5D:374:375
1VQ4:975:976
2OTL:975:976
1VQ6:975:976
1FFK:975:976
1YIJ:975:976
1YJN:975:976
1JJ2:975:976
1VQ7:975:976
3CME:975:976
2QEX:975:976
1VQ8:975:976
3G71:975:976
1NJI:B75:B76
3CMA:975:976
2OTJ:975:976
1Q82:B75:B76
3CC2:975:976
3CPW:975:976
3CCV:975:976
1M90:B75:B76
1YIT:975:976
3CCU:975:976
1VQO:975:976
1KD1:B75:B76
1VQK:975:976
3G6E:975:976
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>< 30 0.072
stacking/>> 3 0.188
base-ribose/W_6BR 2 0.201
stacking/<< 5 0.220
base-phosphate/SW_2BPh 1 0.250
base-ribose/W_5BR 17 0.252
base-ribose/W_3BR 1 0.276
base-phosphate/H_9BPh 2 0.283
base-phosphate/H_0BPh 55 0.326
base-ribose/H_0BR 4 0.331

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol