sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI1-A676-A678
X
>3U5H-5749-5751
X
>3U5D-1743-1745
X
>3OHJ-A676-A678
X
>3OH5-A676-A678
X
>3KNI-A676-A678
X
>3F1F-A688-A690
X
>3F1H-A688-A690
X
</seq>
<hsp>
0 1:0.813287984133
0 2:0.875765124924
0 3:0.8069304473
0 4:0.640888842391
0 5:0.754487848535
0 6:0.948822957027
0 7:0.967498858783
1 2:0.432393900476
1 3:0.545885227849
1 4:0.665399414333
1 5:0.913840997726
1 6:0.997929818913
1 7:1.0
2 3:0.399186486384
2 4:0.501301692195
2 5:0.853342589016
2 6:0.914388535649
2 7:0.922829633381
3 4:0.301145179453
3 5:0.565292701328
3 6:0.716168819394
3 7:0.713159111651
4 5:0.499773879855
4 6:0.680701471737
4 7:0.689015112738
5 6:0.465923464385
5 7:0.467989793019
6 7:0.0492406957942
</hsp>