sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J00-V46-V21
X
>3EPH-E43-E18
X
>1U9S-A35-A145
X
>3R8T-B105-B64
X
>2ZUF-B47-B22
X
>2ZM5-D45-D20
X
>2ZXU-D45-D20
X
</seq>
<hsp>
0 1:0.482405712758
0 2:0.534033748707
0 3:0.439747632873
0 4:0.557648805267
0 5:0.966639719721
0 6:0.924041413169
1 2:0.356568392836
1 3:0.591871032144
1 4:0.643480257976
1 5:0.785566526436
1 6:0.77536014149
2 3:0.696792020409
2 4:0.79523785808
2 5:0.99999966092
2 6:0.990392960287
3 4:0.540118827793
3 5:0.663731787387
3 6:0.613939509942
4 5:0.694556936925
4 6:0.655059999119
5 6:0.0847978752031
</hsp>