sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNH-A427-A455
X
>3CCJ-0280-0346
X
>3CME-0280-0346
X
>3F1E-A436-A464
X
>3F1G-A436-A464
X
>2UUA-A436-A464
X
>2VQF-A436-A464
X
>2VQE-A436-A464
X
>2UXC-A436-A464
X
>2UUB-A436-A464
X
>1N32-A436-A464
X
>1FJG-A436-A464
X
</seq>
<hsp>
0 1:0.723578765999
0 2:0.564126124999
0 3:0.6683296947
0 4:0.676431483731
0 5:0.665672978702
0 6:0.874919314007
0 7:0.792344080446
0 8:1.0
0 9:0.624830499817
0 10:0.901646032197
0 11:0.965169940189
1 2:0.339616800301
1 3:0.462792365631
1 4:0.474402339072
1 5:0.713198435151
1 6:0.8953400647
1 7:0.849265990509
1 8:0.827943578315
1 9:0.665397335953
1 10:0.679459866687
1 11:0.747100914925
2 3:0.245483189615
2 4:0.257544179774
2 5:0.466069595344
2 6:0.633838926323
2 7:0.575735302611
2 8:0.681848115774
2 9:0.385885415081
2 10:0.573715095886
2 11:0.580262908266
3 4:0.0210924192783
3 5:0.435854572892
3 6:0.574025411969
3 7:0.528933846505
3 8:0.699814082136
3 9:0.405536952226
3 10:0.611156363287
3 11:0.587348199268
4 5:0.427892584063
4 6:0.563519832318
4 7:0.519641915102
4 8:0.697717292911
4 9:0.402022341826
4 10:0.611421323324
4 11:0.587782303434
5 6:0.277345828496
5 7:0.209308106914
5 8:0.501310631666
5 9:0.251318346849
5 10:0.466835596991
5 11:0.528283401731
6 7:0.0882740742397
6 8:0.479456579492
6 9:0.309110204392
6 10:0.525582953846
6 11:0.476039613597
7 8:0.487500073764
7 9:0.251186475205
7 10:0.514281789094
7 11:0.483205763268
8 9:0.543784542906
8 10:0.168996749266
8 11:0.253942794119
9 10:0.507454261307
9 11:0.473153357541
10 11:0.280637835571
</hsp>