sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F2T-X8-X99
X
>2YIE-X8-Z46
X
>3KNI-A2560-A2569
X
>2VQE-A1409-A1439
X
>2UUB-A1409-A1439
X
>2VQF-A1409-A1439
X
>1XMQ-A1403-A1433
X
</seq>
<hsp>
0 1:0.30201056165
0 2:0.86546863476
0 3:0.721075267682
0 4:0.495906457945
0 5:0.739738511336
0 6:0.74076435288
1 2:0.693875939058
1 3:0.490622299342
1 4:0.317453432539
1 5:0.492641051149
1 6:0.603283195608
2 3:0.869749971708
2 4:0.869609912534
2 5:0.797284258277
2 6:0.999997136814
3 4:0.280906952067
3 5:0.126043620674
3 6:0.44324625302
4 5:0.31877890131
4 6:0.372583956775
5 6:0.411162395554
</hsp>