ClaRNA

Doublet Group info: classifier/stacking/></GU/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></GU/sub-001
Members:
count: 64
download members
1M90:B21:B54
3I56:0592:0536
3CCR:0592:0536
1N8R:B21:B54
1VQ8:921:954
1VQK:0592:0536
3CC4:0592:0536
1YJ9:0592:0536
1YI2:0592:0536
1VQ4:0592:0536
3CCU:0592:0536
1VQN:0592:0536
1M90:A592:A536
3CXC:0592:0536
1VQP:0592:0536
1YIJ:0592:0536
1VQ6:0592:0536
3OXD:A16:A18
3CPW:0592:0536
1VQ9:0592:0536
1YJW:0592:0536
1Q81:A592:A536
3CMA:921:954
1K8A:A592:A536
1KD1:A592:A536
3OHJ:A53:A56
1JJ2:0592:0536
1K9M:A592:A536
1Q82:B21:B54
1Q82:A592:A536
3CXC:921:954
1S72:0592:0536
1VQ5:0592:0536
3OWW:A16:A18
1QVG:921:954
1VQL:921:954
3OH5:A53:A56
3OH7:A53:A56
1KD1:B21:B54
3CD6:921:954
1K8A:B21:B54
1K9M:B21:B54
3CCU:921:954
3CME:921:954
1S72:921:954
1VQN:921:954
2QEX:0592:0536
3CCV:921:954
3G6E:921:954
1VQO:921:954
1YJN:921:954
1YJ9:921:954
3CC7:921:954
3CC4:921:954
1VQ6:921:954
1VQ5:921:954
3CC2:921:954
1YI2:921:954
3I56:921:954
3F1F:A53:A56
3F1H:A53:A56
3OHZ:A53:A56
2J01:A53:A56
2J03:A53:A56
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>< 3 0.000
stacking/>> 2 0.058
base-phosphate/W_5BPh 17 0.084
base-phosphate/W_4BPh 25 0.102
base-ribose/W_6BR 13 0.132
base-phosphate/H_9BPh 22 0.152
base-phosphate/W_3BPh 4 0.183
stacking/<< 15 0.190
base-ribose/H_9BR 43 0.190
base-ribose/W_5BR 1 0.200

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol