ClaRNA

Doublet Group info: classifier/stacking/></GU/sub-008

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></GU/sub-008
Members:
count: 25
download members
3U5B:2612:2611
2UUA:A544:A543
3R8O:A1082:A1083
3U5F:6609:6608
2J02:A544:A543
3R8O:A564:A563
1XMQ:A544:A543
1J8G:D4:D5
1P79:A3:A4
2UUB:A1061:A1062
1FJG:A544:A543
2VQF:A544:A543
1N32:A544:A543
1J8G:A4:A5
1J6S:B4:B5
2VQE:A1061:A1062
1J8G:C4:C5
1J6S:C4:C5
2VQF:A1061:A1062
2AWE:E4:E5
2AWE:A4:A5
3CCQ:01122:01123
3OHK:A2277:A2330
3OH5:A2277:A2330
3OH7:A2277:A2330
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>< 3 0.066
base-ribose/H_9BR 7 0.088
stacking/>> 2 0.106
base-phosphate/SW_2BPh 36 0.118
base-phosphate/H_9BPh 3 0.157
base-ribose/H_0BR 7 0.213
stacking/<< 2 0.222
base-ribose/H_7BR 53 0.243
base-phosphate/H_7BPh 4 0.245
base-phosphate/H_0BPh 2 0.266

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol