sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHC-A730-A630
X
>3OHD-A730-A630
X
>3OGY-A730-A630
X
>3OHY-A730-A630
X
>1G1X-E36-D16
X
>1F7Y-B50-B15
X
>3R8O-A750-A650
X
>2VQF-A730-A630
X
>1XMQ-A730-A630
X
>1FJG-A730-A630
X
>2J00-A730-A630
X
>2J02-A730-A630
X
</seq>
<hsp>
0 1:0.0415896122475
0 2:0.50007681709
0 3:0.665584781184
0 4:0.686686824039
0 5:0.514382063385
0 6:0.520560815922
0 7:0.493480806827
0 8:0.479258621713
0 9:0.399507603112
0 10:0.383443776381
0 11:0.379155449889
1 2:0.488116997208
1 3:0.659117184496
1 4:0.70111599052
1 5:0.507201562594
1 6:0.51293201914
1 7:0.4617799712
1 8:0.457902774419
1 9:0.376049518704
1 10:0.361884259052
1 11:0.358324332852
2 3:0.463092857811
2 4:0.999995396504
2 5:0.695071935959
2 6:0.714395346042
2 7:0.575086654898
2 8:0.671713218244
2 9:0.591930243922
2 10:0.54452514564
2 11:0.532667778658
3 4:0.998956710421
3 5:0.686498397461
3 6:0.814330314499
3 7:0.650852791739
3 8:0.623668164053
3 9:0.647897821307
3 10:0.555475200151
3 11:0.54406991569
4 5:0.67582936633
4 6:0.596171020179
4 7:0.907738006396
4 8:0.771835656197
4 9:0.724990762329
4 10:0.663769975214
4 11:0.658574997525
5 6:0.748319820605
5 7:0.615184454083
5 8:0.597763856639
5 9:0.597972011167
5 10:0.451498212116
5 11:0.455536499758
6 7:0.599016557272
6 8:0.497455498036
6 9:0.417027236805
6 10:0.43731952113
6 11:0.419667422063
7 8:0.268866508374
7 9:0.223565914904
7 10:0.286470206978
7 11:0.305179794995
8 9:0.187653253819
8 10:0.225090480638
8 11:0.237475616932
9 10:0.18161721185
9 11:0.193481963271
10 11:0.0328471114712
</hsp>