sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ8-0355-0271
X
>3CME-0355-0271
X
>1VQK-0355-0271
X
>3U5B-21742-21743
X
>1VQO-0355-0271
X
>1VQ9-0355-0271
X
>3OHK-A2017-A2018
X
>1VQP-0355-0271
X
>1VQL-0355-0271
X
>1VQN-0355-0271
X
>2J03-A622-A623
X
>3U5H-52703-52702
X
</seq>
<hsp>
0 1:0.247152857444
0 2:0.112084512647
0 3:0.933090835296
0 4:0.305989099639
0 5:0.237586699828
0 6:0.625570410091
0 7:0.339596743089
0 8:0.193757356044
0 9:0.314002980215
0 10:0.679051621401
0 11:0.793103433207
1 2:0.212738806707
1 3:0.966609411311
1 4:0.137251469605
1 5:0.183359256759
1 6:0.690520631864
1 7:0.239535705856
1 8:0.212993974926
1 9:0.198864838753
1 10:0.755589278622
1 11:0.728814185537
2 3:0.873188096232
2 4:0.248139315563
2 5:0.160257088529
2 6:0.589447593296
2 7:0.263845692941
2 8:0.116414879648
2 9:0.26710792369
2 10:0.643660322112
2 11:0.725069999216
3 4:0.873530428284
3 5:0.863004538217
3 6:0.91773325749
3 7:0.896087622518
3 8:0.860681947557
3 9:0.847990599262
3 10:1.0
3 11:0.862193781572
4 5:0.159735540864
4 6:0.731898117556
4 7:0.18184278918
4 8:0.199737592874
4 9:0.128319264499
4 10:0.782873750715
4 11:0.720254016181
5 6:0.654791983518
5 7:0.128755449794
5 8:0.0807239262332
5 9:0.175261368174
5 10:0.658918194915
5 11:0.715708128177
6 7:0.755125755657
6 8:0.652560307928
6 9:0.690784509197
6 10:0.376412533371
6 11:0.458138543188
7 8:0.164808504199
7 9:0.234233648321
7 10:0.738905670266
7 11:0.775567761897
8 9:0.214175591736
8 10:0.659572212604
8 11:0.739628498378
9 10:0.715934492557
9 11:0.671900122534
10 11:0.634458979351
</hsp>