sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-52021-52022
X
>3OHJ-A2413-A2414
X
>3OHK-A2413-A2414
X
>2HOM-A21-A20
X
>3OHK-A622-A623
X
>3OI1-A622-A623
X
>3OHZ-A622-A623
X
>3KNI-A622-A623
X
</seq>
<hsp>
0 1:0.4816545392
0 2:0.47371462399
0 3:0.749795510699
0 4:0.501384886069
0 5:0.550838381118
0 6:0.548108372332
0 7:0.858055135721
1 2:0.0391177070157
1 3:0.923192344927
1 4:0.622647125894
1 5:0.558255371876
1 6:0.55544837571
1 7:1.0
2 3:0.902694240977
2 4:0.605905357547
2 5:0.538841101341
2 6:0.53676293546
2 7:0.981982376549
3 4:0.426856845842
3 5:0.581698694235
3 6:0.611808893665
3 7:0.699597305372
4 5:0.248380247705
4 6:0.275032562954
4 7:0.530100340646
5 6:0.0507288369802
5 7:0.472166294514
6 7:0.464727691407
</hsp>