sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8N-A426-A425
X
>2UXC-A418-A417
X
>2J00-A418-A417
X
>2J02-A418-A417
X
>3F1E-A418-A417
X
>3F1G-A418-A417
X
</seq>
<hsp>
0 1:0.940110061904
0 2:0.999990457904
0 3:0.985694358113
0 4:0.821271719147
0 5:0.844428120904
1 2:0.33241515671
1 3:0.331262328649
1 4:0.446150090427
1 5:0.449691298325
2 3:0.0300343788356
2 4:0.503035284957
2 5:0.519911580196
3 4:0.502437226084
3 5:0.519464383642
4 5:0.0443256175331
</hsp>