sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNH-A1461-A1462
X
>3F1G-A1470-A1471
X
>3F1E-A1470-A1471
X
>2J02-A1470-A1471
X
>3OHY-A1470-A1471
X
>3OGE-A1470-A1471
X
>3OGY-A1470-A1471
X
>3OI0-A1470-A1471
X
>3OHD-A1470-A1471
X
>3OHC-A1470-A1471
X
>2J00-A1470-A1471
X
</seq>
<hsp>
0 1:0.357996442806
0 2:0.34823742914
0 3:0.912553912154
0 4:0.91261839847
0 5:0.981291820875
0 6:1.0
0 7:0.947259144618
0 8:0.951391979185
0 9:0.928768280928
0 10:0.861174954037
1 2:0.0330890999256
1 3:0.679028137816
1 4:0.656684666696
1 5:0.725363478911
1 6:0.741786856721
1 7:0.692823792853
1 8:0.73469644864
1 9:0.711364591335
1 10:0.685320952863
2 3:0.672577885186
2 4:0.64767335042
2 5:0.718796382334
2 6:0.734564169222
2 7:0.682571271031
2 8:0.723158427263
2 9:0.69978155077
2 10:0.675464098166
3 4:0.353605242991
3 5:0.325444239378
3 6:0.340056249386
3 7:0.361126970809
3 8:0.33968936073
3 9:0.323680373268
3 10:0.206054665623
4 5:0.120124289706
4 6:0.128075826445
4 7:0.0627700565964
4 8:0.153232023028
4 9:0.141123840799
4 10:0.398294538978
5 6:0.0446402658211
5 7:0.127853925856
5 8:0.148316390886
5 9:0.148336356294
5 10:0.367113730772
6 7:0.11542969191
6 8:0.152866312748
6 9:0.158140581236
6 10:0.381189159139
7 8:0.147370595387
7 9:0.142659712168
7 10:0.406479483417
8 9:0.0343743826342
8 10:0.329982939289
9 10:0.319041508395
</hsp>